STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK98876.1Integral membrane protein. (301 aa)    
Predicted Functional Partners:
EFL03290.1
Malto-oligosyltrehalose trehalohydrolase.
   
 0.697
EFL02517.1
ATP-dependent DNA helicase PcrA.
    
 
 0.687
EFK98581.1
Mannose-1-phosphate guanyltransferase.
 
 0.676
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.676
EFK98877.1
Predicted protein.
       0.615
EFL02373.1
Conserved hypothetical protein.
  
     0.572
EFL02721.1
Glycogen phosphorylase.
  
 0.565
EFK98879.1
NTP pyrophosphohydrolase.
       0.541
EFK98880.1
Conserved hypothetical protein.
       0.541
EFK98881.1
Predicted protein.
       0.541
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.