Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFK99071.12,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. (198 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.953
argD
Ornithine-oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
    
 0.870
guaA
GMP synthase domain-containing protein; Catalyzes the synthesis of GMP from XMP.
   
  
 0.833
EFL00940.1
Aminotransferase.
    
 0.786
EFL00965.1
Aminotransferase.
    
 0.786
EFK99072.1
Peroxiredoxin.
  
    0.757
EFL02455.1
Succinyldiaminopimelate transaminase.
 
  
 0.738
EFL02457.1
Succinyl-diaminopimelate desuccinylase.
 
   
 0.692
pheT
phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
  
 0.660
EFL00231.1
Ornithine-oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.633
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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