STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK99077.1NifU family SUF system FeS assembly protein. (162 aa)    
Predicted Functional Partners:
EFK99078.1
Cysteine desulfurase, catalytic subunit CsdA; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.999
EFK99308.1
Cysteine desulfurase NifS; Belongs to the sulfur carrier protein TusA family.
  
 0.998
EFL02764.1
Cysteine desulfurase NifS.
  
 0.998
EFK99079.1
FeS assembly ATPase SufC.
 
  
 0.997
EFK99076.1
Metal-sulfur cluster biosynthetic protein.
 
    0.996
EFK99081.1
FeS assembly protein SufD.
 
  
 0.996
EFL04019.1
Cysteine desulfurase, catalytic subunit CsdA.
 
 0.994
EFK99297.1
Cysteine desulfurase, catalytic subunit CsdA.
 
 0.992
EFK99082.1
FeS assembly protein SufB.
 
  
 0.990
EFK99036.1
Aminotransferase.
 
 0.983
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.