STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK99081.1FeS assembly protein SufD. (391 aa)    
Predicted Functional Partners:
EFK99079.1
FeS assembly ATPase SufC.
 
 
 0.999
EFK99077.1
NifU family SUF system FeS assembly protein.
 
  
 0.996
EFK99078.1
Cysteine desulfurase, catalytic subunit CsdA; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.992
EFK99076.1
Metal-sulfur cluster biosynthetic protein.
 
   
 0.964
EFL04019.1
Cysteine desulfurase, catalytic subunit CsdA.
 
 
 0.925
EFK99297.1
Cysteine desulfurase, catalytic subunit CsdA.
 
 
 0.913
EFK99080.1
Nitrite reductase [NAD(P)H], small subunit.
 
     0.910
EFK99082.1
FeS assembly protein SufB.
 
   
0.898
EFK99083.1
DNA-binding protein.
  
    0.783
EFK99074.1
ebrA repressor.
       0.765
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.