Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EFK99083.1DNA-binding protein. (258 aa)    
Predicted Functional Partners:
EFK99082.1
FeS assembly protein SufB.
  
  
 0.982
EFK99081.1
FeS assembly protein SufD.
  
  
 0.875
EFK99079.1
FeS assembly ATPase SufC.
  
  
 0.864
EFK99077.1
NifU family SUF system FeS assembly protein.
  
  
 0.853
EFK99076.1
Metal-sulfur cluster biosynthetic protein.
     
 0.836
EFL02402.1
Transcriptional regulator.
   
    0.771
EFL02984.1
Chromosome replication initiation inhibitor protein; Belongs to the LysR transcriptional regulatory family.
   
    0.763
cobB
Sir2 family regulator protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.758
EFK99078.1
Cysteine desulfurase, catalytic subunit CsdA; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
       0.750
EFK99080.1
Nitrite reductase [NAD(P)H], small subunit.
       0.750
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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