Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFK99088.1Maltose/trehalose porter. (414 aa)    
Predicted Functional Partners:
EFK99089.1
ABC-type sugar transport system.
 
 0.997
EFK99090.1
ABC transporter.
 
 0.997
EFL00825.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.967
EFL02562.1
Sugar transporter integral membrane protein; Overlaps another CDS with the same product name.
 
 0.920
EFK99139.1
Sugar transporter membrane protein.
 
 0.911
EFK98340.1
Extracellular solute-binding protein.
  
  
  0.900
EFK99140.1
Sugar transporter membrane protein.
 
  0.898
EFL02563.1
Sugar transporter integral membrane protein; Overlaps another CDS with the same product name.
 
  0.894
EFK99821.1
Sugar ABC transporter solute-binding protein.
  
  
  0.888
EFL03889.1
Maltose permease.
  
  0.887
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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