Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFK99142.1Hydrolase. (486 aa)    
Predicted Functional Partners:
EFK99141.1
Beta-hexosaminidase.
       0.795
EFK98320.1
Chitinase II.
 
  
 0.726
EFL01895.1
Conserved hypothetical protein.
  
     0.717
EFL01897.1
Conserved hypothetical protein.
  
     0.708
EFL02662.1
Chitinase C.
 
 0.697
EFK98327.1
Exoglucanase A; Belongs to the glycosyl hydrolase family 6.
 
  0.693
EFL02024.1
Secreted protein.
  
     0.648
EFL03925.1
Mycodextranase.
  
    0.646
EFL02335.1
Secreted protein.
  
     0.624
EFL02602.1
Radical SAM domain-containing protein.
  
     0.588
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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