Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFK99173.1ADP-ribosylation/Crystallin J1. (435 aa)    
Predicted Functional Partners:
EFL03296.1
ABC transporter solute-binding protein.
 
     0.716
EFK99174.1
ADP-ribosylation/Crystallin J1.
 
   
0.702
EFK99177.1
Citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family.
 
     0.642
EFK99176.1
acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
     0.621
EFL02859.1
Nitrogen regulatory protein P-II.
    
 
 0.595
EFK99964.1
hydroxylacyl-CoA dehydrogenase.
  
     0.561
EFL04057.1
Transcriptional regulator.
  
     0.466
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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