STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK99212.1Gas vesicle synthesis protein. (76 aa)    
Predicted Functional Partners:
EFK99206.1
Gas vesicle synthesis protein; Truncated CDS.
 
   
 0.978
EFK99210.1
Gas vesicle synthesis protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.976
EFK99211.1
Gas vesicle synthesis protein; Truncated CDS; overlaps another CDS with the same product name.
 
   
 0.970
EFK99209.1
Cyclase/dehydrase.
 
     0.969
gvpA
Gas vesicle synthesis protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.961
EFK99208.1
Predicted protein.
 
     0.959
EFK99213.1
Gas vesicle protein K.
 
   
 0.957
EFK99207.1
Gas vesicle protein G.
 
   
 0.943
EFK99204.1
Gas vesicle synthesis protein.
 
   
 0.916
EFL03558.1
1-deoxy-D-xylulose-5-phosphate synthase.
       0.556
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.