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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK99272.1Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (172 aa)    
Predicted Functional Partners:
EFL03960.1
Ferritin and Dps protein.
  
  
  0.909
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.908
EFL03624.1
Copper oxidase.
   
 
 0.870
EFK99271.1
Oxidoreductase molybdopterin binding.
       0.756
EFK98398.1
Multi-sensor signal transduction histidine kinase.
   
    0.604
EFL01632.1
Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
   
  
 0.566
EFL02965.1
Two-component system sensor kinase.
  
  
 0.564
EFL00660.1
Iron repressor.
      
 0.530
EFL00167.1
Regulatory protein.
  
    0.515
EFK99584.1
Secreted protein.
  
    0.506
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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