Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFK99409.1Rhamnulokinase. (496 aa)    
Predicted Functional Partners:
EFK99411.1
L-rhamnose catabolism isomerase.
 
  
 0.985
EFK99410.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
  
 0.979
EFL03117.1
Rhamnose ABC transporter, rhamnose-binding protein.
 
  
 0.832
EFL03728.1
L-fuculose phosphate aldolase.
 
 
 0.707
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.685
EFL03432.1
L-rhamnose 1-epimerase.
 
  
 0.684
EFL03118.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
    0.620
EFL03119.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
    0.618
EFK98653.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.612
EFL01128.1
Conserved hypothetical protein.
       0.530
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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