Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFK99416.1Conserved hypothetical protein. (265 aa)    
Predicted Functional Partners:
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
     
 0.642
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.605
EFK99417.1
Conserved hypothetical protein.
       0.578
EFK99418.1
protein-(glutamine-N5) methyltransferase, release factor-specific.
       0.578
EFL02712.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Truncated CDS.
  
   0.556
EFL01299.1
Conserved hypothetical protein.
       0.530
EFK98240.1
Sugar isomerase.
  
     0.508
EFK99415.1
Hypothetical protein.
       0.498
EFL00984.1
Conserved hypothetical protein.
  
     0.463
EFL00870.1
Conserved hypothetical protein.
  
     0.433
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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