Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFK99422.1Conserved hypothetical protein. (388 aa)    
Predicted Functional Partners:
EFK99621.1
Transmembrane efflux protein.
  
     0.774
EFK97980.1
Major facilitator transporter.
  
     0.744
EFK99434.1
Integral membrane efflux protein.
  
     0.724
EFL01878.1
Major facilitator superfamily transporter multidrug resistance protein.
  
     0.717
EFL03252.1
Major facilitator superfamily transporter multidrug resistance protein.
  
     0.693
EFL02226.1
Multidrug resistance efflux protein.
  
     0.532
EFK99421.1
Conserved hypothetical protein.
       0.517
EFK98837.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.454
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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