STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK99486.1Conserved hypothetical protein. (178 aa)    
Predicted Functional Partners:
EFK99487.1
DNA-binding protein.
 
     0.940
EFK99485.1
Conserved hypothetical protein.
 
     0.906
EFL00790.1
Transcriptional regulator.
 
     0.770
EFK99164.1
Conserved hypothetical protein; Truncated CDS.
  
     0.685
EFL00444.1
Conserved hypothetical protein.
  
     0.681
EFK98154.1
DNA binding protein.
 
     0.629
EFL01068.1
Regulatory protein.
 
     0.614
EFL02071.1
DNA-binding protein.
 
     0.614
EFL03928.1
Conserved hypothetical protein.
  
     0.605
EFK99491.1
protein-L-isoaspartate(D-aspartate) O-methyltransferase.
 
     0.595
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.