Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFK99524.1Integral membrane protein. (261 aa)    
Predicted Functional Partners:
EFK99526.1
MarR-family transcriptional regulator.
       0.693
EFK99071.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase.
 
     0.587
EFK99525.1
Leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase.
     
 0.555
EFK98228.1
Organic hydroperoxide resistance protein.
       0.530
EFK99074.1
ebrA repressor.
       0.530
EFK99075.1
Integral membrane protein.
       0.530
EFK99523.1
Oxidoreductase.
       0.472
EFL01340.1
Acyltransferase.
  
     0.463
EFK99781.1
Integral membrane protein.
  
     0.446
EFL03562.1
Conserved hypothetical protein.
  
     0.405
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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