STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK99636.1Conserved hypothetical protein. (323 aa)    
Predicted Functional Partners:
EFL02965.1
Two-component system sensor kinase.
  
 0.994
EFL03356.1
Predicted protein.
  
  0.771
EFL00180.1
ArsR family transcriptional regulator.
  
    0.679
EFK98983.1
Two-component system sensor kinase.
 
  0.661
EFK99635.1
Predicted protein.
       0.631
EFL01896.1
Predicted protein.
  
     0.584
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.575
EFK99637.1
Predicted protein.
       0.561
EFK98113.1
DNA-binding protein.
  
     0.554
EFL02249.1
Transcription regulator ArsR.
  
    0.549
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.