Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFK99646.1Transmembrane efflux protein. (140 aa)    
Predicted Functional Partners:
EFK99645.1
Transmembrane efflux protein; Unextendable partial coding region.
     0.987
EFK99642.1
LysR-type transcriptional regulator; Truncated CDS; unextendable partial coding region.
 
     0.752
EFK99291.1
Conserved hypothetical protein.
  
     0.578
EFL01535.1
TetR family transcriptional regulator.
  
     0.546
EFL01383.1
PmrA.
  
     0.455
EFK98837.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.454
EFK99275.1
Anthranilate synthase.
  
  
  0.449
EFL02045.1
Conserved hypothetical protein.
  
     0.427
EFL01308.1
Conserved hypothetical protein.
  
     0.416
EFL00310.1
Conserved hypothetical protein.
  
     0.402
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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