STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK99823.1Sugar transport membrane protein. (301 aa)    
Predicted Functional Partners:
EFK99822.1
Sugar ABC transporter permease.
 
 0.987
EFK99821.1
Sugar ABC transporter solute-binding protein.
 
  0.966
EFL00825.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.953
EFL04130.1
Cellobiose transport permease.
 0.937
EFK99061.1
Extracellular solute binding protein.
 
 0.927
EFL03224.1
ABC transporter permease.
 
 0.922
EFK98341.1
ABC transporter.
 
 0.911
EFK99825.1
Kinase.
 
     0.893
EFL03519.1
Integral membrane binding-protein-dependent transporter.
 0.890
EFK98198.1
Extracellular solute binding protein.
 
 0.888
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.