Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFK99830.1Predicted protein. (198 aa)    
Predicted Functional Partners:
EFL00116.1
Regulatory protein.
    
  0.575
EFK98951.1
Regulatory protein.
    
  0.558
EFL00749.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.519
nhaA
Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
   
    0.519
EFK98963.1
Tetratricopeptide TPR_4.
     
  0.490
EFL00512.1
Tetratricopeptide TPR_2 repeat protein.
     
  0.490
EFL00636.1
Transcriptional regulator.
     
  0.490
EFL01504.1
Predicted protein.
     
  0.490
EFL02585.1
Tetratricopeptide repeat protein.
     
  0.490
EFL03215.1
Conserved hypothetical protein.
     
  0.490
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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