STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK99840.1Surface protein Gram-positive cocci. (470 aa)    
Predicted Functional Partners:
EFK99837.1
Conserved hypothetical protein; Unextendable partial coding region.
 
     0.796
EFL02681.1
Hypothetical protein; Truncated CDS.
  
 
   0.766
EFK98676.1
Secreted protein.
  
     0.758
EFL04243.1
Regulatory protein.
  
     0.750
EFL03371.1
Iron-sulfur protein.
  
     0.748
EFL00980.1
Integral membrane protein.
 
     0.742
EFL04189.1
Integral membrane protein; Unextendable partial coding region.
  
     0.742
EFL02866.1
Conserved hypothetical protein.
  
     0.732
EFK99024.1
Conserved hypothetical protein.
  
     0.725
EFK99442.1
Secreted protein; Overlaps another CDS with the same product name.
  
     0.719
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.