Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFK99898.1IolD protein; Belongs to the TPP enzyme family. (658 aa)    
Predicted Functional Partners:
EFK99899.1
IolB protein.
 
 
 0.999
EFK99901.1
IolE protein.
 
 
 0.990
EFK99900.1
IolC protein.
 
  
 0.974
iolG
Myo-inositol dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
  
 0.897
EFL03416.1
ABC transport system sugar binding lipoprotein; Truncated CDS; unextendable partial coding region.
 
  
 0.872
EFK99897.1
Methylmalonate-semialdehyde dehydrogenase (acylating); Unextendable partial coding region.
 
  
 0.852
EFK99949.1
Acetolactate synthase; Belongs to the TPP enzyme family.
     
  0.852
EFL02788.1
Acetolactate synthase, large subunit, biosynthetic type.
     
  0.852
EFL03418.1
Urea ABC transporter, ATP-binding protein UrtE.
 
  
 0.847
EFL03417.1
Sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
    0.840
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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