Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFK99907.1Copper-translocating P-type ATPase. (769 aa)    
Predicted Functional Partners:
EFK99906.1
Regulator protein; Unextendable partial coding region.
 
 
 0.991
EFL02965.1
Two-component system sensor kinase.
  
  
 0.677
EFK98425.1
Magnesium-translocating P-type ATPase.
 
 
0.588
EFK99006.1
Predicted protein.
     
 0.586
EFL01478.1
Conserved hypothetical protein.
 
  
 0.566
EFK99905.1
Conserved hypothetical protein.
       0.553
EFL03624.1
Copper oxidase.
 
  
 0.531
prcA
20S proteasome alpha-subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family.
     
  0.490
prcB
Proteasome endopeptidase complex, archaeal, beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family.
     
  0.490
EFL00706.1
Integral membrane ATPase.
  
 
 0.482
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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