STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK99952.1Sugar permease. (300 aa)    
Predicted Functional Partners:
EFK99953.1
Sugar ABC transporter permease.
 
   0.973
EFL00825.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.962
EFL04130.1
Cellobiose transport permease.
 0.941
EFK99061.1
Extracellular solute binding protein.
 
 0.932
EFL03224.1
ABC transporter permease.
 
 0.924
EFK98341.1
ABC transporter.
 
 0.912
EFL03749.1
ABC-type sugar transport system.
 
  0.897
EFL03519.1
Integral membrane binding-protein-dependent transporter.
 0.896
EFK98304.1
ABC transporter permease.
 
  0.894
EFK99822.1
Sugar ABC transporter permease.
 
 0.891
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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