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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK99953.1Sugar ABC transporter permease. (316 aa)    
Predicted Functional Partners:
EFK99952.1
Sugar permease.
 
   0.973
EFL00825.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.942
EFK99954.1
ABC transporter.
 
   0.938
EFL03277.1
Transport system membrane protein.
   0.878
EFL02413.1
ABC transporter permease.
 
   0.869
EFK98342.1
ABC-type sugar transport system.
 
   0.868
EFK98197.1
ABC transporter permease.
  
   0.867
EFK98242.1
Sugar transport membrane protein.
  
   0.867
EFL03518.1
Integral membrane binding-protein-dependent transporter.
  
   0.867
EFL03750.1
ABC transporter sugar permease.
 
   0.867
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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