Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFK99953.1Sugar ABC transporter permease. (316 aa)    
Predicted Functional Partners:
EFK99952.1
Sugar permease.
 
  0.976
EFL00825.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.971
EFK99954.1
ABC transporter.
 
  0.951
EFL03888.1
Maltose-binding protein.
 
  0.914
EFL03277.1
Transport system membrane protein.
 
  0.895
EFK98342.1
ABC-type sugar transport system.
  
  0.890
EFL02413.1
ABC transporter permease.
  
  0.890
EFK98197.1
ABC transporter permease.
  
  0.889
EFK98242.1
Sugar transport membrane protein.
  
  0.889
EFL03518.1
Integral membrane binding-protein-dependent transporter.
  
  0.889
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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