STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK99968.1Icc family phosphohydrolase. (620 aa)    
Predicted Functional Partners:
EFL02965.1
Two-component system sensor kinase.
  
 
 0.942
EFK99969.1
Dihydroorotate oxidase B.
 
     0.822
EFL00836.1
Regulatory protein.
     
 0.636
EFL04186.1
Regulatory protein.
     
 0.636
EFL03445.1
Secreted solute-binding lipoprotein.
  
     0.614
EFL02787.1
Integral membrane phosphodiesterase; Truncated CDS; unextendable partial coding region.
  
 
 0.593
guaA
GMP synthase domain-containing protein; Catalyzes the synthesis of GMP from XMP.
    
  0.544
EFL03752.1
Coagulation factor 5/8 type domain-containing protein.
  
     0.542
EFK99954.1
ABC transporter.
  
     0.523
EFL00032.1
DNA-binding protein.
   
 
  0.517
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.