Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFK99993.1Integral membrane protein. (318 aa)    
Predicted Functional Partners:
EFK99994.1
Conserved hypothetical protein.
 
  
 0.983
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.787
ftsH-2
Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.787
EFL02321.1
Membrane protein; Unextendable partial coding region.
     
 0.762
EFK99995.1
PadR-family transcriptional regulator.
       0.690
EFK99996.1
Lipoprotein releasing system, ATP-binding protein.
       0.690
EFK99997.1
Integral membrane protein.
       0.690
EFK99307.1
Cytochrome c oxidase, subunit II.
   
   0.677
EFL02953.1
Protease; Belongs to the peptidase M16 family.
   
  0.631
EFL03045.1
Zinc protease.
   
  0.631
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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