Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00042.1Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family. (57 aa)    
Predicted Functional Partners:
EFL02744.1
Conserved hypothetical protein.
 
    0.632
EFL03930.1
Conserved hypothetical protein.
   
    0.515
EFL00513.1
Conserved hypothetical protein.
   
    0.492
EFL00043.1
Phosphate regulon transcriptional regulatory protein PhoB.
       0.486
EFK98639.1
Conserved hypothetical protein.
  
     0.471
EFL01530.1
mutT.
  
     0.442
EFL02161.1
ABC transporter integral membrane protein.
 
    0.432
EFK98228.1
Organic hydroperoxide resistance protein.
   
    0.431
EFK99835.1
OsmC family protein.
   
    0.431
EFL00044.1
Conserved hypothetical protein.
 
     0.427
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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