Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00093.1Predicted protein. (89 aa)    
Predicted Functional Partners:
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
 
 0.987
EFL00822.1
Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.942
EFL03359.1
Amino acid adenylation.
 
 
 0.906
EFL03360.1
Virginiamycin S synthetase.
 
 
 0.896
EFL00092.1
phytanoyl-CoA dioxygenase.
 
    0.866
EFL00103.1
Predicted protein.
 
  0.857
EFL00104.1
Conserved hypothetical protein; Truncated CDS.
 
  0.857
EFL03763.1
Beta keto-acyl synthase; Truncated CDS.
  
 
 0.857
EFL03352.1
Peptide synthetase.
 
 
 0.838
EFK99565.1
Non-ribosomal peptide synthetase.
 
 0.837
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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