Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00096.1Predicted protein. (522 aa)    
Predicted Functional Partners:
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
    
 0.879
EFL00822.1
Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
    
  0.855
EFL03359.1
Amino acid adenylation.
    
  0.853
EFL03360.1
Virginiamycin S synthetase.
    
  0.853
EFK99565.1
Non-ribosomal peptide synthetase.
    
  0.849
EFL03352.1
Peptide synthetase.
    
  0.849
EFL03358.1
Pristinamycin I synthase 3 and 4.
    
  0.849
EFK99566.1
Non-ribosomal peptide synthetase.
     
  0.729
EFL03763.1
Beta keto-acyl synthase; Truncated CDS.
    
  0.725
EFL03981.1
Amino acid adenylation domain-containing protein.
     
  0.719
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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