Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00108.1Oxidoreductase. (544 aa)    
Predicted Functional Partners:
EFL00109.1
Conserved hypothetical protein.
    
  0.953
EFL00112.1
UnbL; Unextendable partial coding region.
 
  
  0.949
EFL00113.1
UnbL.
 
  
  0.933
EFL00107.1
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.929
EFL00106.1
Wyosine base formation domain-containing protein.
 
  
  0.924
EFL00111.1
Cytochrome P450.
  
  
  0.861
EFL00103.1
Predicted protein.
  
   
 0.780
EFL00105.1
Conserved hypothetical protein.
  
     0.773
EFL00102.1
TebC.
 
     0.772
EFL00636.1
Transcriptional regulator.
  
 
  0.766
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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