Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00129.1Integral membrane protein. (495 aa)    
Predicted Functional Partners:
EFL00128.1
Lipoprotein releasing system, ATP-binding protein.
 
  0.952
EFL01711.1
Conserved hypothetical protein.
   
    0.840
EFK99315.1
Integral membrane efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
    
 0.690
EFL00442.1
Cell division ATP-binding protein FtsE.
 
  0.675
EFL00132.1
Conserved hypothetical protein.
       0.673
EFL00441.1
ABC transporter.
 
  0.644
EFL04096.1
ABC transporter integral membrane protein.
  
 
  0.643
EFK99554.1
Phosphonate ABC transporter, ATP-binding protein.
  
  0.593
EFK99996.1
Lipoprotein releasing system, ATP-binding protein.
  
  0.593
EFL00457.1
Phosphonate C-P lyase system protein PhnK.
  
  0.593
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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