STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL00129.1Integral membrane protein. (495 aa)    
Predicted Functional Partners:
EFL00128.1
Lipoprotein releasing system, ATP-binding protein.
 
  0.959
EFL01711.1
Conserved hypothetical protein.
   
    0.840
EFL00442.1
Cell division ATP-binding protein FtsE.
 
  0.711
EFL00132.1
Conserved hypothetical protein.
       0.690
EFL00441.1
ABC transporter.
  
  0.678
EFK99554.1
Phosphonate ABC transporter, ATP-binding protein.
  
  0.638
EFK99996.1
Lipoprotein releasing system, ATP-binding protein.
  
  0.638
EFL00457.1
Phosphonate C-P lyase system protein PhnK.
  
  0.638
EFL04097.1
Cell division ATP-binding protein FtsE.
  
  0.638
EFL04250.1
D-methionine ABC transporter, ATP-binding protein.
  
  0.638
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.