STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL00195.1N-acetylneuraminate synthase. (323 aa)    
Predicted Functional Partners:
EFL00196.1
Transferase.
 
 0.999
EFL00197.1
Conserved hypothetical protein.
 
   
 0.975
EFL00194.1
Conserved hypothetical protein.
 
   
 0.967
EFL00198.1
Transferase.
 
  
 0.887
EFL00193.1
Conserved hypothetical protein.
 
     0.781
EFL02963.1
Conserved hypothetical protein.
 
  
 0.609
EFL00191.1
Conserved hypothetical protein.
 
     0.557
EFL00185.1
Sugar ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.556
EFL00186.1
Sugar ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.556
EFL00187.1
D-xylose ABC transporter, ATP-binding protein.
       0.556
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.