Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00195.1N-acetylneuraminate synthase. (323 aa)    
Predicted Functional Partners:
EFL00196.1
Transferase.
 
 0.999
EFL00197.1
Conserved hypothetical protein.
 
   
 0.971
EFL00194.1
Conserved hypothetical protein.
 
   
 0.961
EFL00198.1
Transferase.
 
  
 0.886
EFL00193.1
Conserved hypothetical protein.
 
     0.781
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
    
   0.694
EFK98581.1
Mannose-1-phosphate guanyltransferase.
  
 
 0.578
EFL00191.1
Conserved hypothetical protein.
 
     0.556
EFL02963.1
Conserved hypothetical protein.
 
  
 0.554
EFL00185.1
Sugar ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.530
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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