STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL00377.1Regulatory protein. (229 aa)    
Predicted Functional Partners:
cobB
Sir2 family regulator protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.672
EFL02694.1
MarR-transcriptional regulator.
   
    0.636
EFL00378.1
Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.587
EFL02984.1
Chromosome replication initiation inhibitor protein; Belongs to the LysR transcriptional regulatory family.
   
   0.515
EFK99083.1
DNA-binding protein.
   
    0.476
EFL02092.1
Transcriptional regulator.
   
    0.470
EFL02094.1
Transcriptional regulator.
   
    0.470
EFL04134.1
Transcriptional regulator.
  
    0.408
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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