STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL00405.1Predicted protein. (349 aa)    
Predicted Functional Partners:
EFL00404.1
Predicted protein.
       0.620
EFL00406.1
Predicted protein.
       0.574
EFL00407.1
Predicted protein.
       0.573
EFK98309.1
Cell division FtsK/SpoIIIE.
    
   0.429
EFK98609.1
Membrane protein; Unextendable partial coding region.
    
   0.429
EFL00805.1
FtsK/SpoIIIE family protein.
    
   0.429
EFL01115.1
Plasmid transfer protein.
    
   0.429
EFL01370.1
TraB.
    
   0.429
EFL01650.1
Cell division FtsK/SpoIIIE.
    
   0.429
EFL01850.1
Predicted protein.
    
   0.429
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.