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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL00408.1Cyclopropane-fatty-acyl-phospholipid synthase. (437 aa)    
Predicted Functional Partners:
EFL01035.1
Amine oxidase; Truncated CDS.
  
 0.969
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
    
 0.726
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.657
EFL01037.1
Transmembrane protein.
 
     0.589
EFL00409.1
Oxidoreductase.
       0.556
guaA
GMP synthase domain-containing protein; Catalyzes the synthesis of GMP from XMP.
   
 
 0.514
EFL03359.1
Amino acid adenylation.
    
 0.418
EFL03360.1
Virginiamycin S synthetase.
    
 0.418
EFL03762.1
Beta keto-acyl synthase; Truncated CDS; unextendable partial coding region.
     
 0.403
EFL01036.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
    
0.401
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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