Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00417.1Conserved hypothetical protein. (138 aa)    
Predicted Functional Partners:
EFL02737.1
Regulatory protein.
  
   0.778
EFL00418.1
Conserved hypothetical protein; Truncated CDS.
       0.773
EFL01541.1
Regulatory protein.
  
   0.764
EFL00647.1
Regulatory protein.
 
   0.751
EFL00836.1
Regulatory protein.
 
 
 0.738
EFL04186.1
Regulatory protein.
 
 
 0.727
EFL01704.1
Regulatory protein.
  
     0.717
EFK98471.1
Regulatory protein.
  
     0.708
EFL02076.1
Regulator protein containing histidine kinase domain-containing protein.
  
     0.684
EFL02670.1
Anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.668
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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