Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00423.1Conserved hypothetical protein. (162 aa)    
Predicted Functional Partners:
ftsQ
Sporulation protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
 
 
 0.986
EFK99238.1
Cell division protein FtsW; Belongs to the SEDS family.
   
 0.902
EFK99761.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
   
 0.902
EFL01250.1
Cell division protein FtsW; Belongs to the SEDS family.
   
 0.902
EFL02626.1
Cell division protein FtsW; Belongs to the SEDS family.
   
 0.902
EFL00503.1
Penicillin-binding protein.
 
 0.885
EFK99042.1
Penicillin-binding protein 2.
 
 0.884
EFL01249.1
Penicillin-binding protein 2.
 
 0.884
EFK99244.1
Stage V sporulation protein D.
  
 0.868
EFK99762.1
Penicillin-binding protein 2.
  
 0.868
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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