Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL00429.1Oxidoreductase. (318 aa)    
Predicted Functional Partners:
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
  
 0.979
EFL00822.1
Amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.815
EFL00103.1
Predicted protein.
   
  0.798
EFL00104.1
Conserved hypothetical protein; Truncated CDS.
   
  0.798
EFL03763.1
Beta keto-acyl synthase; Truncated CDS.
  
 0.798
EFL03359.1
Amino acid adenylation.
  
 0.760
EFL03360.1
Virginiamycin S synthetase.
  
 0.760
EFL03352.1
Peptide synthetase.
  
 0.755
EFL03358.1
Pristinamycin I synthase 3 and 4.
  
 0.755
EFL03762.1
Beta keto-acyl synthase; Truncated CDS; unextendable partial coding region.
  
 0.719
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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