Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00435.1Secreted protein. (799 aa)    
Predicted Functional Partners:
EFL02223.1
Sugar hydrolase.
 
   
 0.569
EFK99141.1
Beta-hexosaminidase.
 
   
 0.544
EFL04127.1
Hydrolase; Belongs to the glycosyl hydrolase 2 family.
 
     0.498
EFL00211.1
beta-N-acetylglucosaminidase.
 
   
 0.464
EFK98071.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.460
EFL00433.1
Integral membrane protein.
       0.450
EFL00434.1
Secreted protein; Truncated CDS; unextendable partial coding region.
       0.450
EFK98295.1
beta-N-acetylhexosaminidase; Truncated CDS.
 
   
 0.445
EFL03758.1
Predicted protein.
  
     0.422
EFL01790.1
Conserved hypothetical protein.
  
     0.406
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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