Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL00525.1Exodeoxyribonuclease III. (191 aa)    
Predicted Functional Partners:
EFL03483.1
Exodeoxyribonuclease III.
  
  
 
0.888
EFL01747.1
A/G-specific adenine glycosylase; Unextendable partial coding region.
  
 
 0.880
nfo
Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
    
 0.862
EFL00031.1
Conserved hypothetical protein.
  
 0.839
EFK98946.1
Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
  
    0.831
EFL01226.1
DNA polymerase III beta subunit domain-containing protein; Unextendable partial coding region.
   
 0.828
EFL01228.1
DNA polymerase III beta subunit domain-containing protein.
   
 0.828
EFK97948.1
Conserved hypothetical protein.
  
 0.814
EFL00524.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.787
EFL00526.1
Acetyltransferase.
       0.781
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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