Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00602.1Conserved hypothetical protein. (185 aa)    
Predicted Functional Partners:
EFL00283.1
Chorismate mutase.
  
     0.773
EFL00601.1
Predicted protein.
       0.773
EFL02152.1
Conserved hypothetical protein.
  
     0.700
EFL02928.1
prolyl-tRNA synthetase.
  
     0.582
EFL02569.1
Diacylglycerol kinase.
  
     0.537
EFL00144.1
Conserved hypothetical protein.
  
     0.535
EFK99289.1
Glycosyl transferase.
 
     0.521
EFL01263.1
Ion channel membrane protein; Unextendable partial coding region.
  
     0.520
EFK98292.1
Sugar transporter superfamily protein.
 
     0.508
EFL00604.1
Predicted protein.
       0.506
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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