STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL00644.1Monooxygenase; Unextendable partial coding region. (385 aa)    
Predicted Functional Partners:
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.831
EFK97982.1
Calcium binding protein.
    
   0.797
EFK99812.1
Calcium binding protein.
    
   0.797
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
  
  
 0.618
rplQ
Ribosomal protein L17.
 
 
   0.616
EFK98865.1
PlmM.
     
 0.614
EFL00643.1
Pyridoxamine 5'-phosphate oxidase.
 
     0.612
EFL01774.1
NAD-dependent epimerase/dehydratase.
 
 
   0.558
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
   0.554
EFK98974.1
Phospholipid-binding protein.
   
   0.548
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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