STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL00679.1Conserved hypothetical protein. (127 aa)    
Predicted Functional Partners:
EFL00680.1
Conserved hypothetical protein.
       0.773
EFK98406.1
Acetyltransferase.
  
     0.632
EFL00678.1
Oxidoreductase.
       0.546
EFL04098.1
Conserved hypothetical protein.
  
     0.533
EFL01935.1
Conserved hypothetical protein.
  
     0.464
EFL00833.1
Conserved hypothetical protein.
  
     0.439
EFL01562.1
Integral membrane transporter.
  
     0.415
EFK98521.1
Dehydrogenase.
  
     0.402
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.