STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL00689.1Conserved hypothetical protein. (210 aa)    
Predicted Functional Partners:
EFK99429.1
Conserved hypothetical protein.
  
     0.772
EFL01342.1
Conserved hypothetical protein.
  
     0.752
EFL00690.1
NDP-4-keto-6-deoxy-L-hexose 2,3-reductase.
       0.742
EFL01539.1
Conserved hypothetical protein.
  
     0.691
EFL03862.1
Conserved hypothetical protein.
  
     0.665
EFL01823.1
Conserved hypothetical protein.
  
     0.662
EFK99875.1
DNA-binding protein.
  
     0.618
EFL00776.1
Conserved hypothetical protein.
  
     0.613
EFL01754.1
Alanine-rich protein.
  
     0.604
EFL00552.1
Pd2U.
  
     0.603
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.