Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00721.1Conserved hypothetical protein. (113 aa)    
Predicted Functional Partners:
EFK99389.1
Heme oxygenase.
     
  0.707
EFL01142.1
Aminoglycoside phosphotransferase.
  
     0.608
EFL00768.1
Conserved hypothetical protein.
  
     0.490
EFL00002.1
Conserved hypothetical protein.
  
     0.478
EFL01660.1
Glycosyltransferase.
  
     0.466
EFL03621.1
Integral membrane protein.
  
     0.456
EFL01744.1
Two-component system sensor kinase.
  
     0.455
EFK98687.1
Conserved hypothetical protein; Unextendable partial coding region.
  
     0.453
EFL00513.1
Conserved hypothetical protein.
  
     0.452
EFK99935.1
Conserved hypothetical protein.
  
     0.436
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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