STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL00741.1DNA-binding response regulator; Unextendable partial coding region. (266 aa)    
Predicted Functional Partners:
EFL02965.1
Two-component system sensor kinase.
  
 0.994
EFK98983.1
Two-component system sensor kinase.
  
  0.612
EFL00116.1
Regulatory protein.
    
  0.543
EFK99661.1
Predicted protein.
  
  0.501
EFL02787.1
Integral membrane phosphodiesterase; Truncated CDS; unextendable partial coding region.
  
 
 0.490
EFL01127.1
Predicted protein.
   
  0.469
EFL01120.1
Diguanylate cyclase; Unextendable partial coding region.
  
 0.452
EFL00134.1
Secreted protein.
  
  0.435
EFL00272.1
Two-component system sensor kinase.
  
   0.426
EFK98180.1
Two-component system sensor kinase.
   
  0.412
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.