Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00970.1Predicted protein. (139 aa)    
Predicted Functional Partners:
EFL02965.1
Two-component system sensor kinase.
  
 0.993
EFL00969.1
Conserved hypothetical protein.
       0.888
EFL02609.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
    
 0.831
EFL01270.1
Branched-chain alpha keto acid dehydrogenase E1 beta subunit.
    
  0.699
EFL04245.1
Conserved hypothetical protein.
   
 0.657
EFL00877.1
Magnesium or manganese-dependent protein phosphatase.
    
 0.655
EFL00971.1
LuxR-family transcriptional regulator.
    
  0.638
EFL02787.1
Integral membrane phosphodiesterase; Truncated CDS; unextendable partial coding region.
  
 0.616
EFL00079.1
Type II beta-Tyr adenylation domain-containing protein.
  
 0.613
EFL01120.1
Diguanylate cyclase; Unextendable partial coding region.
  
 0.611
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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