Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00978.1Secreted esterase. (486 aa)    
Predicted Functional Partners:
EFL00281.1
Conserved hypothetical protein.
 
  
 
0.905
EFL00845.1
Conserved hypothetical protein.
 
  
 
0.883
EFK98645.1
Secreted protein.
     
  0.774
EFK99299.1
Ubiquinol-cytochrome c reductase cytochrome b subunit.
     
  0.763
EFL01171.1
Cytochrome d ubiquinol oxidase, subunit II.
     
  0.763
EFL01172.1
Cytochrome bd-I oxidase subunit I.
     
  0.763
EFL00707.1
Conserved hypothetical protein.
  
     0.749
EFL01996.1
Conserved hypothetical protein.
  
     0.738
EFK99602.1
Secreted protein.
  
  
  0.700
EFK99302.1
Cytochrome aa3 quinol oxidase, subunit III.
    
  0.686
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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