Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00984.1Conserved hypothetical protein. (599 aa)    
Predicted Functional Partners:
EFL02965.1
Two-component system sensor kinase.
 
 
 0.906
EFL02609.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
    
 
 0.889
EFK99267.1
Serine/threonine-protein kinase PK-1.
   
 
 0.807
EFL01248.1
Serine/threonine protein kinase.
   
 
 0.807
EFL01267.1
Serine/threonine-protein kinase pksC.
   
 
 0.807
EFL01268.1
Serine/threonine protein kinase.
   
 
 0.807
EFK98798.1
Glycine betaine ABC transport system permease.
    
  0.805
EFL00985.1
Conserved hypothetical protein.
       0.777
EFL00836.1
Regulatory protein.
 
 
  0.688
EFL03933.1
Predicted protein.
  
     0.672
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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