Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00987.1Excisionase. (90 aa)    
Predicted Functional Partners:
EFL00986.1
Integrase; Belongs to the 'phage' integrase family.
 
     0.970
EFL03310.1
Integral membrane protein.
  
     0.594
EFL01124.1
Replication initiation protein; Unextendable partial coding region.
 
     0.588
EFL01115.1
Plasmid transfer protein.
 
     0.557
EFL00988.1
phiRv2 prophage protein.
 
     0.534
EFL01118.1
Mobile element transfer protein SpdB.
       0.530
EFL01119.1
Predicted protein.
       0.530
EFL01975.1
Site-specific recombinase Int.
 
     0.518
EFL00989.1
Conserved hypothetical protein; Truncated CDS.
       0.498
EFL02485.1
Conserved hypothetical protein.
  
     0.495
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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